Methylation Studies

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Prader-Willi/Angelman Methylation Studies

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Prader-Willi and Angelman syndromes are examples of disorders involving imprinted genes. Imprinted genes are only expressed from either the maternally or paternally derived member of a homologous chromosome pair.

Prader-Willi syndrome results from the loss of genes that are expressed only from the paternally derived chromosome 15, either through a deletion on the paternally derived chromosome 15 or a maternal uniparental disomy for the chromosome 15 pair.  Angelman syndrome results from the loss of genes that are expressed only from the maternally derived chromosome 15 via a deletion on the maternally derived chromosome 15 or a paternal uniparental disomy for the chromosome 15 pair. This differential gene expression is thought to be controlled by methylation of the DNA on the maternally versus the paternally derived chromosome 15. Southern blot analysis using methylation sensitive restriction enzymes illustrates whether the patient has both maternally derived and paternally derived material in the critical region of chromosome 15.

The molecular diagnosis of Prader-Willi and Angelman syndromes is part of a comprehensive package of services recommended for referred individuals. High resolution cytogenetic analysis, FISH deletion analysis, and/or UPD analysis complete the recommended diagnostic work-up. All of these services are offered at the Greenwood Genetic Center. Prenatal testing is available. Please contact the Molecular Diagnostic Laboratories for details.

Specimen requirements: 5 to 10 ml of peripheral blood collected in an EDTA (lavender top) Vacutainer tube is preferred. The minimal blood needed for reliable DNA isolation is 3 ml. If necessary, ACD solution A Vacutainer tubes (yellow top) may be substituted. Prenatal studies require two confluent T-25 flasks containing amniocytes. A maternal blood sample is also requested for prenatal analysis.

Transport: Please contact the Molecular Diagnostic Laboratory Coordinator (1-800-473-9411) for shipping information. The specimen should be kept at room temperature and delivered via overnight shipping. FedEx delivery is preferred. If shipment is delayed by one or two days, the specimen should be refrigerated and shipped at room temperature. Do not freeze the specimen. Samples collected on a Friday can be safely designated for Monday delivery.

Analysis standards: Analysis will be completed within 2 weeks from sample receipt. The quality and interpretation of test results are assessed by the laboratory director. Technical staff independently assess the quality and interpretation of the test. The Greenwood Genetic Center Molecular Diagnostic Laboratory is CLIA certified and actively participates in CAP proficiency surveys.

Reporting of Test Results: Test results and their interpretation will be mailed and/or faxed following completion of the test. Verbal reports will be telephoned to the person(s) requesting the test when an abnormal test result occurs. Consultation with the laboratory director is available and explanations of testing protocols will be supplied upon request.

CPT Codes: 83890, 83892 (x2), 83894, 83898, 83912

 

 

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Greenwood Genetic Center

Diagnostic Laboratories

125 Gregor Mendel Circle, Greenwood, SC  29646

864-941-8111; 800-473-9411 (toll-free)

fax: 864-941-8133